OK,

So i semi figured it out.

Apparently this issue only occurs when delting folders using Total commander. If you just use dele from windows there is no issue.

I dont know if its a bug in total commander or Open-e but now we know the workaround.

There are however no issues when using Total commander to delete on a regular linux box.

There is some more info here.

http://ghisler.ch/board/viewtopic.php?t=11058

Regards
Jacob